Case study

qPCRLabAutomation

qPCRLabAutomation is a repository focused on end-to-end qPCR workflow automation. It integrates specialized modules for primer design and sequence analysis to support practical workflow operations.

RoleProject creator and software developer

TimelineOngoing

FocusqPCR Workflow Automation

Workflow automationPrimer design pipeline integrationSequence analysis integrationTooling architecture

PythonPrimary language

2Submodules

github.com/MaxwellM34/qPCRLabAutomationRepository

The brief

Challenge

Small labs often need to stitch together multiple manual steps for qPCR design and analysis.

Approach

What we made

Built a unified automation repo and linked focused tooling repos through submodules for primer design and sequence processing.

Structured as a full qPCR workflow automation project.
Includes `primerPlus` submodule for constrained primer design and scoring.
Includes `PrimeSpecPCR` submodule for consensus/alignment via Entrez.

Outcome

Results

A central foundation for scaling qPCR software workflows with less manual handoff across tools.

Pythonprimer3NUPACK (planned)EntrezGit submodules

Gallery

Visual snapshots

Click any image to expand.

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